sequence databases Search Results


saccharomyces cerevisiae up00002311 protein sequence database  (Thermo Fisher)
92
Thermo Fisher saccharomyces cerevisiae up00002311 protein sequence database
Saccharomyces Cerevisiae Up00002311 Protein Sequence Database, supplied by Thermo Fisher, used in various techniques. Bioz Stars score: 92/100, based on 1 PubMed citations. ZERO BIAS - scores, article reviews, protocol conditions and more
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Average 92 stars, based on 1 article reviews
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hv2 region sequence database  (Tajima Shoji Co Ltd)
86
Tajima Shoji Co Ltd hv2 region sequence database
Hv2 Region Sequence Database, supplied by Tajima Shoji Co Ltd, used in various techniques. Bioz Stars score: 86/100, based on 1 PubMed citations. ZERO BIAS - scores, article reviews, protocol conditions and more
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Average 86 stars, based on 1 article reviews
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genbank dna sequence database  (Biotechnical Services Inc)
90
Biotechnical Services Inc genbank dna sequence database
Genbank Dna Sequence Database, supplied by Biotechnical Services Inc, used in various techniques. Bioz Stars score: 90/100, based on 1 PubMed citations. ZERO BIAS - scores, article reviews, protocol conditions and more
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promoter sequence retrieval database eldorado  (Genomatix gmbh)
90
Genomatix gmbh promoter sequence retrieval database eldorado
Promoter Sequence Retrieval Database Eldorado, supplied by Genomatix gmbh, used in various techniques. Bioz Stars score: 90/100, based on 1 PubMed citations. ZERO BIAS - scores, article reviews, protocol conditions and more
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proteins sequences from swissprot vertebrates’ database  (Gallus BioPharmaceuticals)
90
Gallus BioPharmaceuticals proteins sequences from swissprot vertebrates’ database
Proteins Sequences From Swissprot Vertebrates’ Database, supplied by Gallus BioPharmaceuticals, used in various techniques. Bioz Stars score: 90/100, based on 1 PubMed citations. ZERO BIAS - scores, article reviews, protocol conditions and more
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Average 90 stars, based on 1 article reviews
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multilocus sequence type (mlst)  (Ridom GmbH)
90
Ridom GmbH multilocus sequence type (mlst)
Illustration of the collected samples and recovered isolates. ST indicates sequence type. cgMLST indicates core genome <t>multilocus</t> sequence typing. Asterisk indicates two ST958 isolates that were left out of the cgMLST scheme due to poor sequence quality.
Multilocus Sequence Type (Mlst), supplied by Ridom GmbH, used in various techniques. Bioz Stars score: 90/100, based on 1 PubMed citations. ZERO BIAS - scores, article reviews, protocol conditions and more
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Average 90 stars, based on 1 article reviews
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lifeseq annotated gene and expressed sequence-tag databases; proteome bioknowledge library species-specific protein information databases; bioinformatics software  (Incyte corporation)
90
Incyte corporation lifeseq annotated gene and expressed sequence-tag databases; proteome bioknowledge library species-specific protein information databases; bioinformatics software
Illustration of the collected samples and recovered isolates. ST indicates sequence type. cgMLST indicates core genome <t>multilocus</t> sequence typing. Asterisk indicates two ST958 isolates that were left out of the cgMLST scheme due to poor sequence quality.
Lifeseq Annotated Gene And Expressed Sequence Tag Databases; Proteome Bioknowledge Library Species Specific Protein Information Databases; Bioinformatics Software, supplied by Incyte corporation, used in various techniques. Bioz Stars score: 90/100, based on 1 PubMed citations. ZERO BIAS - scores, article reviews, protocol conditions and more
https://www.bioz.com/result/lifeseq annotated gene and expressed sequence-tag databases; proteome bioknowledge library species-specific protein information databases; bioinformatics software/product/Incyte corporation
Average 90 stars, based on 1 article reviews
lifeseq annotated gene and expressed sequence-tag databases; proteome bioknowledge library species-specific protein information databases; bioinformatics software - by Bioz Stars, 2026-05
90/100 stars
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nucleotide sequence database  (Celera)
90
Celera nucleotide sequence database
Illustration of the collected samples and recovered isolates. ST indicates sequence type. cgMLST indicates core genome <t>multilocus</t> sequence typing. Asterisk indicates two ST958 isolates that were left out of the cgMLST scheme due to poor sequence quality.
Nucleotide Sequence Database, supplied by Celera, used in various techniques. Bioz Stars score: 90/100, based on 1 PubMed citations. ZERO BIAS - scores, article reviews, protocol conditions and more
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genomics sequence databases  (Incyte corporation)
90
Incyte corporation genomics sequence databases
Illustration of the collected samples and recovered isolates. ST indicates sequence type. cgMLST indicates core genome <t>multilocus</t> sequence typing. Asterisk indicates two ST958 isolates that were left out of the cgMLST scheme due to poor sequence quality.
Genomics Sequence Databases, supplied by Incyte corporation, used in various techniques. Bioz Stars score: 90/100, based on 1 PubMed citations. ZERO BIAS - scores, article reviews, protocol conditions and more
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Average 90 stars, based on 1 article reviews
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single cell sequencing data  (BioTuring Inc)
90
BioTuring Inc single cell sequencing data
Illustration of the collected samples and recovered isolates. ST indicates sequence type. cgMLST indicates core genome <t>multilocus</t> sequence typing. Asterisk indicates two ST958 isolates that were left out of the cgMLST scheme due to poor sequence quality.
Single Cell Sequencing Data, supplied by BioTuring Inc, used in various techniques. Bioz Stars score: 90/100, based on 1 PubMed citations. ZERO BIAS - scores, article reviews, protocol conditions and more
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Average 90 stars, based on 1 article reviews
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est cluster sequence from the lifeseq® database incyte cluster no. 101368  (Incyte corporation)
90
Incyte corporation est cluster sequence from the lifeseq® database incyte cluster no. 101368
Illustration of the collected samples and recovered isolates. ST indicates sequence type. cgMLST indicates core genome <t>multilocus</t> sequence typing. Asterisk indicates two ST958 isolates that were left out of the cgMLST scheme due to poor sequence quality.
Est Cluster Sequence From The Lifeseq® Database Incyte Cluster No. 101368, supplied by Incyte corporation, used in various techniques. Bioz Stars score: 90/100, based on 1 PubMed citations. ZERO BIAS - scores, article reviews, protocol conditions and more
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nucleotide sequences database for the bacterial  (Aviragen Inc)
90
Aviragen Inc nucleotide sequences database for the bacterial
Illustration of the collected samples and recovered isolates. ST indicates sequence type. cgMLST indicates core genome <t>multilocus</t> sequence typing. Asterisk indicates two ST958 isolates that were left out of the cgMLST scheme due to poor sequence quality.
Nucleotide Sequences Database For The Bacterial, supplied by Aviragen Inc, used in various techniques. Bioz Stars score: 90/100, based on 1 PubMed citations. ZERO BIAS - scores, article reviews, protocol conditions and more
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Image Search Results


Illustration of the collected samples and recovered isolates. ST indicates sequence type. cgMLST indicates core genome multilocus sequence typing. Asterisk indicates two ST958 isolates that were left out of the cgMLST scheme due to poor sequence quality.

Journal: Frontiers in Microbiology

Article Title: Genomic epidemiology of nosocomial carbapenemase-producing Citrobacter freundii in sewerage systems in the Helsinki metropolitan area, Finland

doi: 10.3389/fmicb.2023.1165751

Figure Lengend Snippet: Illustration of the collected samples and recovered isolates. ST indicates sequence type. cgMLST indicates core genome multilocus sequence typing. Asterisk indicates two ST958 isolates that were left out of the cgMLST scheme due to poor sequence quality.

Article Snippet: Sequence types (ST) were analyzed using multilocus sequence type (MLST) (Becker et al., ) in Ridom SeqSphere+- (Ridom, Munster, Germany).

Techniques: Sequencing

Genomic characteristics for the 32 Citrobacter freundii isolated from post-cleaning hospital environment sampling (HE, n = 12) and untreated municipal wastewater (WW, n = 20).

Journal: Frontiers in Microbiology

Article Title: Genomic epidemiology of nosocomial carbapenemase-producing Citrobacter freundii in sewerage systems in the Helsinki metropolitan area, Finland

doi: 10.3389/fmicb.2023.1165751

Figure Lengend Snippet: Genomic characteristics for the 32 Citrobacter freundii isolated from post-cleaning hospital environment sampling (HE, n = 12) and untreated municipal wastewater (WW, n = 20).

Article Snippet: Sequence types (ST) were analyzed using multilocus sequence type (MLST) (Becker et al., ) in Ridom SeqSphere+- (Ridom, Munster, Germany).

Techniques: Isolation, Sampling, Transmission Electron Microscopy, Bla VIM Assay

A minimum spanning tree of ad hoc core genome multilocus sequence typing (cgMLST) of 51 carbapenemase-producing Citrobacter freundii isolates, forming clusters 1 (ST18), 2 (ST8), and 3 (ST421). Each circle represents one or multiple identical sequences, and the numbers between the circles indicate the allele differences. Text in the circle indicates the isolate identification number and sample month/year; colors indicate the sample type [human specimen (yellow), hospital environment (green), and untreated municipal wastewater (blue)]. Human specimen isolates (1–6) originated from the national CPE strain collection and were obtained from clinical specimens (isolates 1, 2, and 5), screening specimens (isolates 3 and 4), and an unspecified sample type (isolate 6). Isolates 1–4 have been published previously by Räisänen et al. . The seed genome was NZ_CP007557.1, and the cgMLST was based on 2007 targets, pairwise ignoring missing values.

Journal: Frontiers in Microbiology

Article Title: Genomic epidemiology of nosocomial carbapenemase-producing Citrobacter freundii in sewerage systems in the Helsinki metropolitan area, Finland

doi: 10.3389/fmicb.2023.1165751

Figure Lengend Snippet: A minimum spanning tree of ad hoc core genome multilocus sequence typing (cgMLST) of 51 carbapenemase-producing Citrobacter freundii isolates, forming clusters 1 (ST18), 2 (ST8), and 3 (ST421). Each circle represents one or multiple identical sequences, and the numbers between the circles indicate the allele differences. Text in the circle indicates the isolate identification number and sample month/year; colors indicate the sample type [human specimen (yellow), hospital environment (green), and untreated municipal wastewater (blue)]. Human specimen isolates (1–6) originated from the national CPE strain collection and were obtained from clinical specimens (isolates 1, 2, and 5), screening specimens (isolates 3 and 4), and an unspecified sample type (isolate 6). Isolates 1–4 have been published previously by Räisänen et al. . The seed genome was NZ_CP007557.1, and the cgMLST was based on 2007 targets, pairwise ignoring missing values.

Article Snippet: Sequence types (ST) were analyzed using multilocus sequence type (MLST) (Becker et al., ) in Ridom SeqSphere+- (Ridom, Munster, Germany).

Techniques: Sequencing